вторник, 13 марта 2012 г.

Schools not serving young blacks

Recently I got together with a guy who grew up in my oldneighborhood in Harlem, around 145th St. and St. Nicholas Avenue. Aswe talked about the old days, the world that we discussed seemed likesomething from another planet, compared with today.

There have been many good changes but, on net balance, it isdoubtful whether kids growing up in our old neighborhood today haveas much chance of rising out of poverty as we did.

That is not because poverty is worse today. It is not. My friendremembers times when his father would see that the children were fed,but would go to bed without eating dinner himself. There were othertimes when his father would walk to work in downtownManhattan_several miles away_rather than spend the nickel it took toride the subway.

Things were not quite that grim for me, but my family was by nomeans middle class. None of the adults had gotten as far as theseventh grade. Down South, before we moved to New York, most of theplaces where we lived did not come with frills like electricity orhot running water.

Some people have said that my rising from such a background wasunique. But it was not. Many people from that same neighborhood wenton to have professional careers, and I am by no means either the bestknown or the most financially successful of them.

Harry Belafonte came out of the same building where my oldschoolmate lived. One of the guys from the neighborhood was listed inone of the business magazines as having a net worth of more than $200million today. If anyone had told me then that one of the guys on ourblock was going to grow up to be a multimillionaire, I would havewondered what he was drinking.

Not everybody made it. One of my old buddies was found shot deadsome years ago, in what looked like a drug deal gone bad. But manypeople from that neighborhood went on to become doctors, lawyers, andacademics_at least one of whom became a dean and another a collegepresident.

My old schoolmate retired as a psychiatrist and was livingoverseas, with servants, until recently deciding to return home. Buthome now is not Harlem. He lives in California wine country.

Why are the kids in that neighborhood today not as likely to havesuch careers_especially after all the civil rights "victories" andall the billions of dollars worth of programs to get people out ofpoverty?

What government programs gave was transient and superficial. Whatthey destroyed was more fundamental.

My old schoolmate recalls a teacher seeing him eating his brownbag lunch in our school lunchroom. A forerunner of a later generationof busybodies, she rushed him over to the line where people werebuying their lunches and gave some sign to the cashier so he wouldnot have to pay.

Bewildered at the swift chain of events, he sat down to eat andthen realized what had happened. He had been given charity! He gaggedon the food, and then went to the toilet to spit it out.

He went hungry that day because his brown bag lunch had beenthrown out. He had his pride_and that pride would do more for him inthe long run than any lunches.

His father also had his pride. He tore to shreds a questionnairethe school had sent home to find out about their students' livingconditions. Today, even middle-class parents with Ph.D.s tamely goalong with this kind of meddling. Moreover, people like his fatherhave been made superfluous by the welfare state_and made to look likechumps if they pass it up.

What the school we went to gave us was more precious than gold. Itwas an education. That was what schools did in those days.

We didn't get mystical talk about the rain forests, and nobodygave us condoms or chirped about diversity. And nobody would tolerateour speaking anything in school but the king's English.

After finishing junior high school, my friend was able to pass thetest to get into the Bronx High School of Science, where the averageIQ was 135, and yours truly passed the same test to get intoStuyvesant High School, another selective public school that today'scommunity "leaders" denounce as elitist.

The rest is history. But it is a history that today's young blacksare unlikely to hear_and are less likely to repeat.

Thomas Sowell is a senior fellow at Hoover Institute in Californiaand an author.

Ex-Kosovo PM Faces War Crimes Tribunal

THE HAGUE, Netherlands - Kosovo's former prime minister and two other alleged rebel fighters from the province's brutal conflict with Serbia go on trial Monday at the Yugoslav war crimes tribunal charged with a campaign of ethnic cleansing aimed at Serbs and their supporters.

The trial comes at a time of rising tensions in the Serbian province, with Belgrade rejecting a U.N.-brokered plan aimed at giving Kosovo internationally supervised statehood, and many ethnic Albanians rejecting the proposal as not going far enough toward full independence.

Ramush Haradinaj - a commander with the Kosovo Liberation Army who turned to politics after the 1998-99 war and became the province's prime minister - faces a maximum life sentence if convicted of war crimes and crimes against humanity including murder, rape, torture and persecution.

Also on trial are Idriz Balaj, alleged to be the former leader of a special unit known as the Black Eagles, and Lahi Brahimaj, whom prosecutors say was one of Haradinaj's deputies in the western Kosovo region of Dukagjin. All three have pleaded not guilty to the allegations in their 37-count indictment.

Prosecutors portray Haradinaj as a ruthless commander in the rebel Kosovo Liberation Army whose forces resorted to murder, rape, torture and expulsions to drive Serbs and their supporters out of Dukagjin between March 1 and Sept. 30, 1998, so rebels could take total control of the area.

Prosecutors say that while the three did not personally commit all the alleged crimes, Haradinaj, Balaj and Brahimaj are held responsible for them because the offenses were part of a "joint criminal enterprise" to expel and mistreat Serbs and the three were part of the enterprise.

After the war, Haradinaj rose through the political ranks and served for 100 days as prime minister of U.N.-administered Kosovo, but resigned as soon as he was indicted in March 2005 and turned himself in to U.N. court declaring his innocence.

He was allowed to return home while he awaited trial and resumed limited political responsibilities as leader of the Alliance for the Future of Kosovo party. His two co-defendants have remained in custody since 2005 at the U.N. court's detention unit in The Hague, Netherlands.

Billboards with the slogan "With Ramush" have sprouted across the province in recent days, and hundreds of supporters cheered as he left Kosovo to return to The Hague for his trial.

"He is going to The Hague not only to defend himself, but to defend our war for freedom," Prime Minister Agim Ceku said. "We're convinced that truth and justice are on Ramush's side."

Among allegations in the indictment are that Balaj was present when KLA forces cut off the nose of Sali Berisha, a Gypsy they believed was a Serb collaborator.

According to the indictment, Berisha and two other Gypsies were then tortured and killed. Balaj "cut each of the three men on their necks, arms and thighs, rubbed salt into the wounds and sewed them up," it alleges. He then wrapped the men in barbed wire and stabbed one of them in the eye, prosecutors say.

"The three men were tied behind Idriz Balaj's vehicle and dragged in the direction of Lake Radonjic. They were killed while in KLA custody," the charges claim.

Their bodies were later found in a canal leading into the lake and identified using DNA analysis, the prosecutors allege. Their remains were among several bodies found at the canal.

Increasing tension around the trial was the unveiling last month of a U.N. plan that would grant greater rights and security to Kosovo's small Serbian minority while putting the province under internationally supervised self-rule and giving it elements of statehood, such as a flag, anthem, army and constitution.

`Abducting Diana'

Through April 29

TinFish Theatre, 4247 N. Lincoln

Tickets, $15. (773) 549-1888

Somewhat recommended

In the political farces of Italian playwright Dario Fo, broadcomedy and lewd jokes are employed for the greater good to mock thosein power. In "Abducting Diana," the Fourth Estate bears the brunt ofthe gibes.

It's a target that Chicago audiences seem to appreciate. Whilebarbs about the rich and ruling classes fall flat in the TinFishproduction of "Abducting Diana," ridicule of the media is wellserved.

In this Americanized version of Fo's play (using StephenStenning's adaptation for the British stage) media baroness DianaForbes-McKaye is kidnapped by a bungling trio of captors disguised inpoliticians' party masks.

Director Kerstin Broockmann puts on a tight show. The delivery oflines and pace of the physical humor is rapid-fire. "Abducting Diana"unfolds as if Abbott and Costello had stopped by Starbucks for a mega-java before bantering about baseball. The few fumbled lines areeasily overlooked as the audience is drawn into the silliness.

As the bumbling kidnappers' vixen victim, Karen Foley is apowerhouse. With her hair done up like devil's horns, the actressblazes around the stage_first as a safety-conscious seductress andthen as the harried abductee who quickly determines she is more adeptat crime than her captors.

Fortunately, Ed Dzialo provides a solid match for Foley's fierystage presence. As the hapless Kidnapper No. 2, easily the mostidiotic of the bunch, Dzialo holds his own, even from the fridge thatserves as his home for much of the play's second act. (Yes, thebizarre plot takes farce to an absurd level.)

The other characters are entertaining, if underdeveloped. AbdulMalik's Kevin is overly dim, while Joseph Lutz's Chief Kidnapper isunconvincing as the self-appointed brains behind the outfit. KevinKenneally's Kidnapper No. 3 makes the bloodthirsty seem boring.

Despite moments of comic flair (such as the "Charlie's Angels"allusion), "Abducting Diana" tries to be too ambitious. A trick setpiece crucial to the climax would be more effective if not operatedby a stagehand waving to the house.

The play also is hindered by too much stage business, poor costumechoices (a really obvious disguise) and poorly played pantomime andcommedia dell'arte elements. Though the humor is obvious, it wouldwork even better if presented with consistency.

понедельник, 12 марта 2012 г.

Effects of oligomerization and secondary structure on the surface behavior of pulmonary surfactant proteins SP-B and SP-C

ABSTRACT The relationship among protein oligomerization, secondary structure at the interface, and the interfacial behavior was investigated for spread layers of native pulmonary surfactant associated proteins B and C. SP-B and SP-C were isolated either from butanol or chloroform/methanol lipid extracts that were obtained from sheep lung washings. The proteins were separated from other components by gel exclusion chromatography or by high performance liquid chromatography. SDS gel electrophoresis data indicate that the SP-B samples obtained using different solvents showed different oligomerization states of the protein. The CD and FTIR spectra of SP-B isolated from all extracts were consistent with a secondary structure dominated by [alpha]-helix. The CD and FTIR spectra of the first SP-C corresponded to an [alpha]-helical secondary structure and the spectra of the second SP-C corresponded to a mixture of [alpha]-helical and [beta]-sheet conformation. In contrast, the spectra of the third SP-C corresponded to antiparallel [beta]-sheets. The interfacial behavior was characterized by surface pressure/area ([pi]-A) isotherms. Differences in the oligomerization state of SP-B as well as in the secondary structure of SP-C all produce significant differences in the surface pressure/area isotherms. The molecular cross sections determined from the [pi]-A isotherms and from dynamic cycling experiments were 6 nm^sup 2^/dimer molecule for SP-B and 1.15 nm^sup 2^/molecule for SP-C in [alpha]-helical conformation and 1.05 nm^sup 2^/molecule for SP-C in [beta]-sheet conformation. Both the oligomer ratio of SP-B and the secondary structure of SP-C strongly influence organization and behavior of these proteins in monolayer assemblies. In addition, [alpha]-helix [arrow right] [beta]-sheet conversion of SP-C occurs simply by an increase of the summary protein/lipid concentration in solution.

INTRODUCTION

Pulmonary surfactant contains four specific proteins: SP-A, SP-B, SP-C, and SP-D. SP-A and SP-D are hydrophilic proteins and as members of the collectin family of proteins contribute to host defense against invading pathogens (Haagsmann and Diemel, 2001; Crouch and Wright, 2001). SP-B and SP-C are extremely Hydrophobic and play important roles in regulating surface tension in the lungs, thereby preventing alveoli collapse (Weaver, 1998; Perez-Gil and Keough, 1998).

Ovine SP-B consists of 79 amino acids and has a molecular weight of 8690 Da. The content of hydrophobic amino acids in SP-B is 40.5% (11 Val, 13.9%; 15 Leu, 19%; and 6 Ile, 7.6%). Mature SP-B is commonly a homodimer in many species, with two monomeric units linked by disulphide bounds at Cys 48. Bovine SP-B occurs also as covalent trimer (Haagsmann and Diemel, 2001; Hawgood et al., 1998), and oligomeric forms of ovine SP-B have been described (Bunger et al, 2001). SP-B is remarkably thermally stable, and its [alpha]-helical domains are not much influenced by reduction of the disulfide bounds (Hawgood et al., 1998). SP-B is essential for lung function and its absence is lethal (Nogee, 1998). Despite the functional importance of SP-B, little is known about the biophysical activity of the different oligomeric forms.

Ovine SP-C consists of 35 amino acids and has a molecular weight of 4200 Da. The content of hydrophobic amino acids in SP-C is 65.7% (12 Val, 34.3%; 7 Leu, 20%; and 4 Ile, 11.4%). Despite its low molecular weight, SP-C has several structural features. The [alpha]-helical valyl-rich domain consists of amino acids in positions 11-34 and is 25 amino acids long.

Palmitoylation of the cysteines at positions 5 and 6 increases hydrophobicity of SP-C (Johansson et al., 1994; Johansson, 1998; Weaver, 1998). Dimeric SP-C that has almost exclusively [beta]-sheet structure and is not acylated enhances the surface tension lowering properties of surfactant (Baatz et al., 1992). The [beta]-sheet structure of SP-C develops from an [alpha]-helix located at the amino acids in position 11-34 upon incubation in solution (Kallberg et al., 2001). Removal of the palmitoyl groups accelerates [alpha]-helix [arrow right] [beta]-sheet conversion and fibril formation. Amyloidlike fibrils of SP-C were found in lung washings from patients with alveolar proteinosis (Gustafsson et al., 2001). The specific functional role of SP-C for breathing and the consequences of [alpha]-helix [arrow right] [beta]-sheet conversion are unknown.

The experimental determination of the conformation and the secondary structure of a protein provides understanding of the protein function. The conformation of proteins can be changed during each single step of pretreatment, isolation, and purification procedures, as well as sample preparation for the different methods used for the spectroscopic measurements (Lohner et al., 1997; Heremans and Smeller, 1998).

To date, there are only a few studies about the effect of the isolation method on surfactant protein conformation and the influence of protein conformation on the interfacial behavior. Therefore, the first objective of this study is to investigate the structure of hydrophobic surfactant proteins obtained by different isolation and purification procedures using circular dichroism (CD), Fourier transform infrared (FTIR) and matrix-assisted laser desorption/ionization time-of-flight mass (MALDI-TOF) spectroscopy. A second objective of this study is to compare the interfacial behavior of SP-B and SP-C with their structural data and to determine the molecular cross section of these proteins. Surface behavior of SP-B and SP-C monolayers was evaluated in a captive bubble surfactometer using axisymmetric drop shape analysis (ADSA).

MATERIALS AND METHODS

Materials

Chloroform (Ultra-Resi analyzed) was obtained from J.T. Baker (Griesheim, Germany) and methanol (LiChrosolv, gradient grade) from Merck (Darmstadt, Germany). Water was purified by means of a Milli-Q Plus Water System (Millipore, Eschborn, Germany) and had a surface tension of 72.4 + or - 0.2 mN/m at 23[degrees]C as determined by using the axisymmetric drop shape analysis for captive bubbles (ADSA-CB) (Prokop et al., 1998). All glass vessels used for this study and the measuring cell were cleaned in KOH-saturated isopropanol.

Isolation of SP-B and SP-C

The pulmonary surfactant was obtained from cell-free sheep lung lavage fluid after 2-h centrifugation at 53,000 g. The pellet was homogenized in 1.64 N NaBr for density gradient centrifugation at 100,000 g overnight. (Hawgood et al., 1985; Pison et al., 1989). The pellicle was removed, washed, and homogenized in 4 mL water and the hydrophobic surfactant components were extracted into either 1-butanol (Bunger et al., 2000) or chloroform/methanol (Folch et al., 1957). The hydrophilic components of pulmonary sheep surfactant were discharged and the remaining solvents containing the hydrophobic surfactant components were evaporated in vacuum at 40[degrees]C and residues were weighed.

The first residue contained the hydrophobic components of pulmonary surfactant from butanol extraction (lipids, SP-B-1, and SP-C-1). It was weighted and resolved in 5 mL acidified (5% 0.1 M HCl) chloroform/methanol (1:1, v/v). Surfactant proteins were isolated using gel exclusion chromatography on LH-60 column (100 x 2.6 cm ID) (Pharmacia, Upsala, Sweden) with 5% 0.1 M HCl acidified chloroform/methanol (1:1, v/v) solvent as the mobile phase. SP-B-1 and SP-C-1 fractions were collected (50 ml of each protein) and aliquots of the solutions (1.5 ml) with final concentration of 0.04 to 0.06 mg/ml were stored at -20[degrees]C. The final concentration was determined using the HPLC method as described elsewhere (Bunger et al., 2000).

The second residue contained the hydrophobic components of pulmonary surfactant from chloroform/methanol extraction (lipids, SP-B-2 and SP-C-2). It was resolved in 5 mL acidified (5% 0.1 N trifluoroacetic acid) chloroform/methanol (1:1, v/v). Surfactant proteins were isolated using a semipreparative HPLC column (250 x 10 mm ID) with Vydac C4, a butyl silica gel (Bunger et al., 2000). SP-B-2 and SP-C-2 fractions were collected, the solvent was evaporated and the purified proteins weighted and then redisolved in chloroform/methanol (1:1, v/v) to give a final concentration of ~0.8 -1.0 mg/ml. Aliquots were stored at -20[degrees]C.

The third residue contained the hydrophobic components of pulmonary surfactant from chloroform/methanol extraction (lipids, SP-B-3 and SP-C-3). It was resolved in 1.5 mL acidified (5% 0.1 N trifluoroacetic acid) chloroform/methanol (1:1, v/v) but then treated as the second residue. It should be emphasized that the only difference between residues 2 and 3 is the concentration of their protein/lipid extracts entering the HPLC column.

On SDS polyacrylamide gel electrophoresis (16% gels) under nonreducing conditions, SP-B-1 showed a single wide band centered at ~23-24 kDa, and SP-B-2 and SP-B-3, at ~29 kDa. SP-C-1, SP-C-2, and SP-C-3 showed only one band at ~5 kDa (Fig. 1). Table 1 summarizes the three isolation and purification procedures that were used to obtain SP-B and SP-C.

Mass spectrometry

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of the protein samples was performed as previously described (Plasencia et al., 2001) on a BIFLEX time-of-flight instrument (Bruker-Franzen Analytik, Bremen, Germany) operated in the positive mode. A saturated solution of sinapinic acid in acetonitrile:water (1:2) with 0.1% trifluoroacetic acid was used as the matrix. Equal volumes of the matrix and the sample

air cushion of at least 0.1 [mu]l after filling of the syringe needle with the spreading solution. Standard syringes were used with a sharp, 90[degrees] cut needle tip (pst3), which guarantees proper contact of the needle with the bubble surface. The spreading solution was slowly and gently injected on to the surface of the bubble under continuous video monitoring. After optimization of all parameters it was possible to spread even 0.4 [mu]l solution without an problems caused by solvent vapors in the bubble. Ten min after solvent evaporation and equilibration of the surface film, protein monolayers were continuously compressed. To evaluate the spreading quantity of protein, each spreading experiment was repeated 5-10 times.

The surface pressure-area isotherms were plotted using nm^sup 2^/molecule calculated by using a molecular weight for SP-B of 17,380 (dimer, 158 amino acid residues) and 4200 for SP-C (dipalmitoylated form, 35 amino acid residues).

It is not possible to determine the point where a monolayer is compressed to its complete coverage without auxiliary experiments. This critical point corresponds to the minimal area demand per molecule or molecule cross section. During further compression of protein monolayer, the formation of bi- or multilayers begins. This point can be determined using dynamic monolayer cycling, i.e., repeated fast monolayer compression/dilatation. The compression of the monolayer to molecular areas smaller than the minimal area demand per molecule yields a gradual shift of the whole isotherm to the left, i.e., to smaller molecular areas.

Therefore, after [pi]-A isotherm measurements, dynamic cycling of the monolayer was carried out by compressing and expanding the bubble surface. For cycling experiments the bubble volume was continuously changed at 10 cycles per min.

RESULTS

Mass spectrometry

Molecular masses of SP-B and SP-C were determined using MALDI-TOF MS. The main peak of all SP-B samples was caused by the [M + H]^sup +^ ion of the dimeric protein (Table 2).

There were no crucial differences between SP-B-1, SP-B-2, and SP-B-3 concerning their mass spectra if the measurements were carried out using a protein concentration of 0.05-0.1 mg/ml. If the concentration of the protein increased to 0.8-1.0 mg/ml as for SP-B-3, the molar masses were consistent with dimeric and oligomeric forms of SP-B-3 (Bunger et al., 2001). Additionally, the HPLC chromatogram of SP-B-1 showed two peaks corresponding to the dimeric and oligomeric forms of protein, whereas only one peak corresponding to the oligomeric form of SP-B-2 and SP-B-3 was found (unpublished).

The differences between the theoretical molecular mass of ovine SP-B (17380) and the average masses of the major forms of SP-B-1 (17558), SP-B-2 (17424), and SP-B-3 (17423) are shown in Table 2. They are consistent with possible protein modification by the solvents (Taneva et al., 1998), i.e., butanol in the case of SP-B-1 and methanol in the case of SP-B-2 and SP-B-3.

Common mass spectra were obtained for SP-C samples (Fig. 2). The SP-C-1 showed a main component with an [M + H]^sup +^ ion at m/z 4217; SP-C-2 and SP-C-3, however, showed a main component with an [M + H]^sup +^ ion at m/z 4201, indicating that monomeric SP-C is predominantly dipalmitoylated (Table 2). The difference between the theoretical molecular mass of ovine SP-C (4201) and the average masses of the major forms of SP-C-1 (4217) is consistent with possible protein modification by the solvent used for the second step of the isolation procedure (methanol) or by oxidation of Met33 (Griffiths et al., 1998).

started to increase at a surface coverage of 23 nm^sup 2^/molecule. This particular point, the so-called liftoff point, was similar for all investigated SP-B samples. The isotherm for SP-B-1 had one plateau region between 20 and 25 mN/m. In contrast, the SP-B-2 isotherm had a plateau region at a much higher surface pressure, i.e., 42 to 46 mN/m, whereas SP-B-3 had a corresponding plateau at 44 to 50 mN/m. The starting point of plateaus for all SP-B samples corresponds to a critical area of 12.5-12.8 nm^sup 2^ per molecule. Molecular cross sections were almost identical for all three SP-B samples, i.e., ~6 nm^sup 2^/molecule or 0.038 nm^sup 2^/amino acid respectively.

The minimal area demands on molecule cross sections for all proteins were determined using dynamic cycling experiments. An example of the first and the tenth compression/dilatation cycle for monolayer of one of SP-C samples is given in Fig. 7.

The [pi]-A isotherms for monolayer compression of SP-C samples are shown in Fig. 8. The SP-C-1 and SP-C-2 isotherms consist of two separate curves (points and line) taken from two experiments, one of which was carried out in the lower surface pressure region and the other in the upper region. The surface pressure for each of the three SP-C samples lifted off at different molecular areas, which are given in Table 1. The SP-C-1 isotherm had at least three plateau regions, the first plateau at [pi]~15 mN/m, the second at [pi]~30 mN/m, and a third at [pi]~37-43 mN/m. Furthermore, there was a slightly pronounced inflection point at 25 mN/m. The SP-C-2 isotherm had a distinct plateau at 22-25 mN/m and a plateau at [pi]~37-4-3 mN/m. Both plateaus of the SP-C-2 isotherm had the appropriated pendant in the SP-C-1 curves. The isotherm of SP-C-3 had an absolutely unusual shape. The surface pressure increased very quickly during compression to ~60 mN/m after collapse of the monolayer. The starting points of plateaus are given in Table 1. The starting point of the last SP-C-1 and SP-C-2 plateau is a critical area of 2.3-2.4 nm^sup 2^ per molecule. The molecule cross sections of SP-C-1 and SP-C-2 were similar, ~1.15 nm^sup 2^/molecule or 0.034 nm^sup 2^/amino acid. The molecule cross section of SP-C3 was different: 1.05 nm^sup 2^/ molecule or 0.03 nm^sup 2^/amino acid. Fig. 9 represents the [pi]-A isotherms for monolayers of all proteins recalculated for area per one amino acid residue of each protein. The parameters which characterize surface behavior and which were drawn from the isotherms of SP-B and SP-C samples are summarized in Table 1.

DISCUSSION

In the present study we evaluate the conformation of native hydrophobic surfactant proteins SP-B and SP-C isolated from sheep lung washings by either butanol or chloroform/methanol lipid extraction using gel exclusion or high performance liquid chromatography. SDS gel electrophoresis data and the structural data obtained from CD and FTIR spectroscopy are compared with the interfacial behavior of the pure proteins.

From examination of SDS gel electrophoresis data under nonreducing conditions it appears that the SP-B-1 sample extracted using butanol had a higher molecular weight than porcine SP-B (Fig. 1 A), but a lower molecular weight than SP-B-2 and SP-B-3 samples extracted in chloroform/methanol. These data suggest that the SP-B-1 sample consists mostly of dimers and probably trimers, whereas the SP-B-2 and SP-B-3 samples are mostly trimers. The existence of dimer/oligomer mixture in the SP-B-1 sample was additionally confirmed by the appearance of two peaks in HPLC chromatograms. By contrast, the chromatograms of the other samples showed only one peak. Therefore, it was concluded that the use of butanol instead of chloroform/methanol may decrease the oligomerization of SP-B.

The appearance of SP-B trimers in our preparation is consistent with a report by Baatz et al. (2001), who described trimers of SP-B in bovine lung surfactant. Oligomerization of modified human SP-B (Cys48Ser) expressed in transgenic mice was studied by Zaltash et al. (2001), who found more noncovalent dimers of SP-B (Cys48Ser) if the polarity of the solvent was decreased and/or if the concentration of SP-B increased. In chloroform/methanol solutions multimeric forms of the protein were observed as well. These results are in full agreement with our own observations that changes in the protein purification procedure, such as protein/lipid concentration and/or solvent polarity, obviously change the oligomerization state of protein. The oligomerization state of SP-B might be important for in vivo function as suggested by Beck et al. (2000).

The secondary structure of SP-B and SP-C was evaluated using CD and FTIR spectra. The CD and FTIR spectra of all three SP-B samples were consistent with the secondary structure of [alpha]-helix, as were the CD and FTIR spectra of SP-C-1. The CD spectrum and FTIR data of SP-C-2 showed that this sample consists of a mixture of two protein conformations: [alpha]-helix and [beta]-sheet. In contrast, the CD and FTIR spectra of SP-C-3 strongly corresponded to secondary structure of antiparallel [beta]-sheet.

Comparing the purification protocols of SP-C-1 and SP-C-2, we assumed that the [alpha]-/[beta]-conversion of protein could be caused either by utilization of chloroform/methanol instead of butanol in the extraction step or by the utilization of HPLC instead of gel exclusion chromatography. Comparing the purification protocols of SP-C-2 and SP-C-3, it is essential to note that the both chloroform/methanol extracted SP-C samples differed only in their protein/lipid concentration after extraction (Table 1); all other parameters of the isolation procedure were identical. We concluded that the formation of [beta]-sheets in SP-C-3 sample occurred after resolving of protein/lipid extracts in an extremely small amount of solvent but before the separation of proteins from lipids. This [beta]-sheet formation probably took place by exceeding the summary critical micelle concentration of the protein/ lipid mixture in the organic solvent, and not as a result of separation.

The phospholipid concentration of the SP-C-2 containing extracts was 70 mg/ml (0.1 M, considering all lipids as DPPC) and the total protein concentrations was 1.5 mg/ml. The lipid concentration of SP-C-3 containing extract, however, was 330 mg/ml (0.45 M, considering all lipids as DPPC) and the total protein concentration was 6 mg/ml. For example, the critical micelle concentration of DPPC in methanol is 1 x 10^sup -2^ M (Smith and Tanford, 1972). It was also found (Datta et al., 1992) that DPPC exists as reverse micelles in chloroform solutions at concentrations beyond 6 x 10^sup 3^ M. This means that the driving force of [alpha]-/[beta]-conversion was definitively the extremely high concentration of protein/lipid extracts of the SP-C-3 sample.

Our assumption that the protein/lipid concentration influences the secondary structure of SP-C is supported by several other studies. Blondelle and co-workers (Blondelle et al., 1997) used different concentrations of monomeric sodium dodecyl sulfate (SDS) to mimic a lipid environment

[alpha]-helix oriented vertically to the interface plane in a highly compressed monolayer. The cross section of two palmitoyl groups is ~0.4 nm^sup 2^ , yielding a cross section for the apolar [alpha]-helix of ~0.75 nm^sup 2^. This size corresponds to the size of a single [alpha]-helix as deduced above for SP-B and reported for transmembrane helices (Bowie, 1997).

Finally, from the results described in this paper, we would like to comment on the biological consequences of extensive alpha-to-beta transformation in SP-C. Several human diseases of different etiology are characterized by the extracellular deposition of amyloidlike fibrils, a process that is initiated by the transition of [alpha]-helices into [beta]-sheets of amyloid-forming proteins (Guijarro et al., 1998; Baskakov et al., 2001). Our results suggest that [alpha]-helix to [beta]-sheet transition could originate as a simple consequence of increase of the summary protein/lipid concentration in the alveolar or cellular environment, similar to the [alpha]-helix [arrow right] [beta]-sheet conversion occurring in the SP-C-3 sample. The mechanism may be common in the development of several human diseases of different etiology characterized by the extracellular deposition of amyloid (Soto, 1999) and may influence lung diseases such as alveolar proteinosis, acute respiratory distress syndrome, and lung fibrosis.

The authors are grateful to L. Kaufner and H. Bunger for protein isolation and determination of protein concentration; G. Brezesinski for technical support at the CD experiments; U. Bentrup for kind assistance with the FTIR experiments; and I. Plasencia and A. Prieto, for technical support with PAGE and mass spectrometry analyses.

Financial support by the Deutsche Forschungsgemeinschaft (Grant Pi 165/ 7) and Spanish Direccion General de Investigacion Cientifica y Tecnica (BIO2000-0929) is gratefully acknowledged.

[Sidebar]

Biophysical Journal Volume 84 March 2003 1940-1949

[Reference]

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[Author Affiliation]

N. Wustneck,* R. Wustneck,[dagger] J. Perez-Gil,[double dagger] and U. Pison*

* Humboldt-Universitat Berlin, Charite Campus Virchow-Klinikum, Anaesthesiologie, Berlin, Germany;

[double dagger] Departamento Bioquimica y Biologia Molecular I, Facultad Biologia, Universidad Complutense, Madrid, Spain; and

[dagger] Universitat Potsdam, Institut fur Physik, Potsdam, Germany

[Author Affiliation]

Submitted June 21, 2002, and accepted for publication November 20, 2002.

Address reprint requests to N. Wustneck, Humboldt-Universitat Berlin, Charite Campus Virchow-Klinikum, Anaesthesiologie, Augustenburger Platz 1, D-13344 Berlin, Germany. E-mail: wustneck@charite.de.

(C) 2003 by the Biophysical Society

0006-3495/03/03/1940/10 $2.00

Sprinklers save water, beautify lawn

Installing an automatic watering kit yourself will decrease yourwater bills, save time and produce healthy, attractive lawns andgardens.

Nine out of 10 people overwater. This retards plant growth bycausing the fine root hairs to die and excessively cools soil. Italso blocks air, killing tiny "good" insects. Automatic wateringkits help fine tune watering for specific climates.

First, determine your soil type and plan the automatic wateringpattern. In sandy soil, water soaks in quickly, forming acarrot-shaped moist area under the water source. In clay soil, itsoaks in slowly, forming a flat shape. In good loam soil, it formsa bulb pattern.Check your soil type by mixing it with water in a glass jar.Within two minutes, sand settles to the bottom. Silt will settle ontop of the sand within two hours. Clay settles overnight. The ratiodetermines the type of soil.The two automatic watering methods are drip and sprinklers.Automatic drip watering is more efficient and is ideal for gardensand landscaped areas. Automatic sprinklers are good for large openlawn areas.The heart of any watering system is a water-saving automaticelectronic controller. It controls the area to be watered, time andwater amount.You can purchase complete drip watering kits or assemble yourown system from simple components. Some tiny drippers (emitters)cost less than $1 each. Multiple drippers and mini-sprayers costjust a couple of dollars. The quantity of each component neededdepends on landscaping.Small water lines are laid flat and may be covered with mulch.Dripper outlet spacing and water flow varies with type of emitters.As a rule of thumb, figure 625 gallons of water provides 1 inch ofwater over a 1,000-square-foot area.There are many designs of fixed-pattern and rotating sprinklersavailable. For the most quiet operation, select a gear-driven rotarydesign instead of an older, impact-rotary design.Update Bulletin No. 532 lists manufacturers of automatic dripand sprinkler kits and timers, prices, a recommended wateringschedule, soil chart and a typical yard watering layout. Send $2 anda business-sized, self-addressed, stamped envelope to: James Dulley,6906 Royalgreen Dr., Cincinnati, Ohio 45244. Or instant download:www.dulley.comJames Dulley is an engineer and writer based in Cincinnati.

Canada Finds 6th Case of Mad Cow Disease

TORONTO - Canada confirmed on Tuesday its sixth case of mad cow disease and said it would investigate where the cow was born and what other animals may have eaten the same feed.

The Canadian Food Inspection Agency said test results confirmed what was suspected last week. The animal was at least 15 years of age, and was born before Canada implemented restrictions on potentially dangerous feed in 1997.

The agency said it was launching an investigation.

Mad cow disease is believed to spread through feed, when cows eat the contaminated tissue of other cattle. Humans can get a related disease, variant Creutzfeldt-Jakob Disease, in similar fashion - by eating meat contaminated with mad cow. There have been more than 150 human deaths worldwide linked to the variant.

Two of the six confirmed mad cow cases in Canada have involved animals that were infected after 1997, when a ban was instituted on the use of cattle parts in feed for cattle, or other ruminants such as sheep and goats.

The agency says Canada's food supply is safe, and the level of mad cow disease in the national cattle herd is very low. Canada has an estimated national herd of 17 million cattle.

U.S. Agriculture Department spokesman Ed Loyd said last week trade was resumed with Canada with the assumption that more mad cow cases would be found. Loyd said U.S. officials have "a high level of confidence in the safeguards and mitigating measures in place in the U.S. and Canada."

George Luterbach, an animal scientist with the Canadian Food Inspection Agency, said the latest case should not have any repercussions internationally.

"It is unwelcome news but not necessarily unexpected news," Luterbach said, adding "it should have little or no implications internationally."

Having tested 60,000 cattle last year, Luberbach said the agency is confident that mad cow is not a common in Canada or something that is growing.

Shipments of live cattle to the United States were halted in 2003 after the first reported mad cow case in Canada. Trade in young animals resumed last year, but there has been no word on when the border may be reopened to older animals.

Hugh Lynch-Ftaunton, president of the 90,000-member Canadian Cattlemen's Association, said some Asian and European countries may wait to see the final report on the latest case before reopening their borders to Canadian cattle.

"Some of the countries that are on the verge of dealing with us differently will probably want to study the report on this and that might slow it down marginally but I don't think it's going to be make or break," Lynch-Ftaunton said.

Last month, Canada announced it was broadening restrictions on animal feed in an effort to fight mad cow disease. The Agency revealed measures, to be phased in over the next year, aimed at keeping potentially risky cattle parts from all animal feed, not just feed destined for cows.

The parts will also be banned from pet food and fertilizers to avoid the risk of inadvertent cross-contamination of feed on farms and ranches.

Clay is gay (shocking!)

"I don't think anyone cares. Let's face it - it's 2008. Who cares? It's like being told Santa Claus isn't real."

- Simon Cowell's candid reaction to the news that Clay Aiken has come out. Kinda like when Jim Verraros ("Al" season 1) told him he came out-Simon's response was, "When were you in?"

This week's column is SO big, it's the size of two columns. So to get all the dish, check out www.BillyMasters.com because my print editors would kill me if I tried to squeeze everything in.

I can't think of an entertainer more beloved than Dolly Parton. Just mention her name and people smile. So it should corneas no surprise that the world premiere of "9 To 5: The Musical" penned by Dolly was eagerly anticipated. The star-studded audience at LA's Ahmanson Theatre gave Dolly Parton and Lily Tomlin a standing ovation just for walking into the theater (Jane Fonda missed this opportunity by arriving too early). The trio sat together alongside film-nemesis Dabney Coleman, and the show began. Fifteen minutes in, a technical snafu - not unlike the one at the first preview. And, as on that first night, Dolly got up and entertained the audience with stories about bringing the show to the stage, effusively thanking her film colleagues - especially Jane Fonda who put the flick together -and sang the title song. All the while, fans took photos and videos to the great displeasure of the ushers who appeartohave been instructed to confiscate all cameras and cell phones - including that of Tomlin's escort! Oh, it was gonna be a memorable night.

Just as Dolly was about to sing "I Will Always Love You," she was informed the show was ready to resume, but they'd wait for her to sing the song. "Nah, I'll save that for the next time it breaks down!" Turns out that didn't happen. Instead, we were treated to a faithful adaptation of the film with a winning trio of actresses - Allison Janney, Megan Hilty, Stephanie J. Block. All our favorite moments were recreated effortlessly to the delight of the opening night crowd. And if Parton's score itself is less than memorable, it's nonetheless pleasant and tuneful. The show is undoubtedly a crowd-pleaser and, with some tinkering, should be a huge hit when it arrives on Broadway in the spring.

The next day, the Emmys - at the brand new Nokia Theatre LIVE. There was a huge delay getting onto the red carpet as police closed in on the perimeter. First we were told that a knife was found in a vehicle. Itturned outthe police found a rifle in someone's car, which made me wonder if Sarah PaMn was in town! Maybe she moved on from caribou to Kirstie Alley! All the while, I'm standing in the blazing sun waiting to go through a metal detector! As annoyed as I was, I was better off than Christina Applegate, Glenn Close, Tom Hanks and Kevin Bacon who had to duck for cover behind a wall after being let out of their limos. Drama, drama, drama.

I figure the show is about to start when that little midget, Ryan Seacrest, practically knocks me over climbing down from his perch for E! Against my better judgment, I rush into the theater, only to find out there is no alcohol. You know what that means? I'll never run into Charlie Sheen! And there are about a million bathrooms -so no place to stalk the unsuspecting stars. Rushing by me were Ricky Schroeder and his wife Andrea, who is on "Top Design." Andrea and I chatted for a moment (she was impressed that I recognized her dress from the window display challenge on "Top Design"). Then I followed herhubby into the men's room. As I sidled up to the next urinal, I stopped myself from saying hi to Little Ricky.

The show was what it was - what can I say? Denis Leary said it best -"I had no empathy for how bad these five hosts were. And after opening I was like, you know what? I want to see them crash and burn on live TV- I want to see them melt.. .I was offended as a comedian. I'm so sick and tired of people saying, 'You just write funny lines and put anyone up there.' No. To be funny is actually a job and it takes required training." Sing it!

Maybe La Seacrest should have been more concerned about material and less concerned about capturing footage of Jeff Probst naked for his private collection. Ryan, for some unknown reason, became obsessed with videotaping a shirtless Probst backstage prior to the show starting. Yes, Jeff looks hot, but I'm a gay man. What's your excuse, Ryan? We'll post his video on BillyMasters.com.

Back to the Emmys. Despite a lack of smoking section and alcohol, several stars were buzzing around during the show. Alan Cumming, Mark Wahlberg, Seth Meyers, Jeremy Piven, Conan O'Brien, Lee Pace, Brooke Shields and Kevin Dillon were all spotted.

After a quick appearance at the Governors Ball, we were off to the best party in town - the HBO party. Year after year, this swanky soir�e has become the placete be seen. It might have something to do with HBO repeatedly winning more Emmys than any other network. Everyone was there. Big winner of the night Tina Fey couldn't have been nicer(didya know she's married toa little person?), while Amy Poehlerwas kinda crabby (which might have to do with her being about 200 months pregnant). Alec Baldwin was getting his freak-on on the dance floor, while Jamie Foxx wouldn't allow anyone to come between him and the bitches. Everyone wanted to talk to Jay Roach, director of "Recount," which meant more time for me and his missus, Susanna Hoffs.

The TV Guide party featured DJ Samantha Ronson. Of course, the big news was when Lindsay called "Lovelines" the following night and confirmed her Sapphic relationship. ...well, kinda. When Stryker asked how long they've been going out, Lindsay laughed and then said, "A long.. .a very long time." Not exactly saying, "I eat pussy," but it's a start.

On the same day, Clay gave "People" magazine the obligatory "Yes I'm Gay" cover story. Notto bash him oranything, but it's awfully suspect when people come out hot on the heels of a CD tanking, a failed TV show, a lost movie career, or the break-up of a band. That's why I give so much credit to Neil Patrick Harris - probably at the peak of his career and talking about it openly.

In case you're wondering, Clay's "People" cover shot with the kid did NOT garner the big bucks Brad and Angie and the twins got. While the Brangelina shot had a price tag of a few million (donated to charity), Clay pocketed about half a mil.

When Clay being gay is news, it's definitely time to end yet another column. I promised a jam-packed column, and I delivered, if I do say so myself. And yet, I have tons of stories sitting here. They could turn up on www.BillyMasters.com. If you have any questions, feel free to write me at Billy@BillyMasters.com and I promise to get back to you before Denis is invited to host next year's Emmys! So, until next time, remember, one man's filth is another man's bible.